Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.52■□□□□ 0.4
Srrm1Q52KI8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm1Q52KI8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Srrm1Q52KI8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Srrm1Q52KI8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Srrm1Q52KI8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.52■□□□□ 0.39
Srrm1Q52KI8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Srrm1Q52KI8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Srrm1Q52KI8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Srrm1Q52KI8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Gm18889-201ENSMUST00000174284 929 ntBASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Gm22175-201ENSMUST00000175007 78 ntBASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Gm27301-201ENSMUST00000184012 127 ntBASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm1Q52KI8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Gm18489-201ENSMUST00000172565 551 ntBASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Gm43125-201ENSMUST00000201724 730 ntBASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.5■□□□□ 0.39
Srrm1Q52KI8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm1Q52KI8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm1Q52KI8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm1Q52KI8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm1Q52KI8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm1Q52KI8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm1Q52KI8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Srrm1Q52KI8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Srrm1Q52KI8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms