Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Gm15653-201ENSMUST00000119247 907 ntBASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Gm25144-201ENSMUST00000179561 110 ntBASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Gm25352-201ENSMUST00000179815 110 ntBASIC19.31■□□□□ 0.68
Shank3Q4ACU6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Gm16026-204ENSMUST00000162652 683 ntBASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shank3Q4ACU6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Gm16215-201ENSMUST00000161990 637 ntBASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Gm18737-201ENSMUST00000173594 937 ntBASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.29■□□□□ 0.68
Shank3Q4ACU6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shank3Q4ACU6 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.28■□□□□ 0.68
Shank3Q4ACU6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Gm6912-201ENSMUST00000117218 544 ntBASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.28■□□□□ 0.68
Shank3Q4ACU6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Gm9063-201ENSMUST00000223299 582 ntBASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shank3Q4ACU6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Gm8410-201ENSMUST00000117225 605 ntBASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Shank3Q4ACU6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shank3Q4ACU6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shank3Q4ACU6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shank3Q4ACU6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shank3Q4ACU6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shank3Q4ACU6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shank3Q4ACU6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms