Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Gm18489-201ENSMUST00000172565 551 ntBASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf223Q3UV31 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Gm27300-201ENSMUST00000184085 97 ntBASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Gm27335-201ENSMUST00000184758 97 ntBASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf223Q3UV31 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Gm14494-201ENSMUST00000118786 435 ntBASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.16■□□□□ 0.02
Rnf223Q3UV31 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf223Q3UV31 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms