Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Gm18624-201ENSMUST00000220966 658 ntBASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Gm26461-201ENSMUST00000175064 290 ntBASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Spg11Q3UHA3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Gm4984-201ENSMUST00000115987 360 ntBASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Gm15806-201ENSMUST00000120696 955 ntBASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Spg11Q3UHA3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.33□□□□□ -0.11
Spg11Q3UHA3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Spg11Q3UHA3 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.33□□□□□ -0.12
Spg11Q3UHA3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Gm9002-201ENSMUST00000178437 499 ntBASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Spg11Q3UHA3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Gm10499-201ENSMUST00000174094 934 ntBASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Olfr582-201ENSMUST00000098212 960 ntBASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms