Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brf2Q3UAW9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Brf2Q3UAW9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brf2Q3UAW9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Brf2Q3UAW9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brf2Q3UAW9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brf2Q3UAW9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.77□□□□□ -0.04
Brf2Q3UAW9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brf2Q3UAW9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brf2Q3UAW9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brf2Q3UAW9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brf2Q3UAW9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Gm14859-201ENSMUST00000117752 357 ntBASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brf2Q3UAW9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Gm9172-201ENSMUST00000212092 954 ntBASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms