Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptchd3Q0EEE2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Gm11336-201ENSMUST00000118168 334 ntBASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Gm22697-201ENSMUST00000175194 63 ntBASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptchd3Q0EEE2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Gm27389-201ENSMUST00000183622 195 ntBASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ptchd3Q0EEE2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Gm36967-201ENSMUST00000193814 266 ntBASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Gm44450-201ENSMUST00000199528 114 ntBASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Gm18101-201ENSMUST00000215769 548 ntBASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptchd3Q0EEE2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms