Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.63■□□□□ 0.73
Cacna1sQ02789 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Gm4204-201ENSMUST00000110798 1231 ntBASIC19.62■□□□□ 0.73
Cacna1sQ02789 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Gm8602-201ENSMUST00000184045 607 ntBASIC19.62■□□□□ 0.73
Cacna1sQ02789 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Gm37748-201ENSMUST00000194379 1140 ntBASIC19.62■□□□□ 0.73
Cacna1sQ02789 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.62■□□□□ 0.73
Cacna1sQ02789 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.62■□□□□ 0.73
Cacna1sQ02789 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Gm12091-201ENSMUST00000146791 830 ntBASIC19.61■□□□□ 0.73
Cacna1sQ02789 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Gm45668-201ENSMUST00000211271 493 ntBASIC19.61■□□□□ 0.73
Cacna1sQ02789 Dupd1-202ENSMUST00000224735 548 ntBASIC19.61■□□□□ 0.73
Cacna1sQ02789 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Rassf8-202ENSMUST00000058538 1131 ntBASIC19.61■□□□□ 0.73
Cacna1sQ02789 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.61■□□□□ 0.73
Cacna1sQ02789 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1sQ02789 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1sQ02789 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Gm15653-201ENSMUST00000119247 907 ntBASIC19.6■□□□□ 0.73
Cacna1sQ02789 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Gm43630-201ENSMUST00000201550 776 ntBASIC19.6■□□□□ 0.73
Cacna1sQ02789 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC19.6■□□□□ 0.73
Cacna1sQ02789 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Cacna1sQ02789 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1sQ02789 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1sQ02789 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.59■□□□□ 0.73
Cacna1sQ02789 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1sQ02789 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC19.59■□□□□ 0.73
Cacna1sQ02789 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1sQ02789 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1sQ02789 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1sQ02789 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1sQ02789 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.59■□□□□ 0.73
Cacna1sQ02789 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cacna1sQ02789 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1sQ02789 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cacna1sQ02789 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.58■□□□□ 0.73
Cacna1sQ02789 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1sQ02789 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1sQ02789 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1sQ02789 Gm6266-201ENSMUST00000203844 806 ntBASIC19.58■□□□□ 0.73
Cacna1sQ02789 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.58■□□□□ 0.73
Cacna1sQ02789 AC238811.1-201ENSMUST00000225302 441 ntBASIC19.58■□□□□ 0.73
Cacna1sQ02789 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.58■□□□□ 0.73
Cacna1sQ02789 AC155729.1-201ENSMUST00000227758 544 ntBASIC19.58■□□□□ 0.73
Cacna1sQ02789 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1sQ02789 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1sQ02789 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1sQ02789 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms