Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a1Q00780 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col8a1Q00780 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a1Q00780 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.34□□□□□ -0.27
Col8a1Q00780 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a1Q00780 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a1Q00780 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col8a1Q00780 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col8a1Q00780 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a1Q00780 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a1Q00780 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col8a1Q00780 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a1Q00780 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a1Q00780 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a1Q00780 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col8a1Q00780 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a1Q00780 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col8a1Q00780 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col8a1Q00780 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col8a1Q00780 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Col8a1Q00780 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Col8a1Q00780 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.33□□□□□ -0.27
Col8a1Q00780 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col8a1Q00780 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col8a1Q00780 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col8a1Q00780 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.33□□□□□ -0.28
Col8a1Q00780 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Mir6977-201ENSMUST00000184960 64 ntBASIC13.33□□□□□ -0.28
Col8a1Q00780 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.33□□□□□ -0.28
Col8a1Q00780 Gm45747-201ENSMUST00000212203 999 ntBASIC13.33□□□□□ -0.28
Col8a1Q00780 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col8a1Q00780 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col8a1Q00780 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col8a1Q00780 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col8a1Q00780 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Col8a1Q00780 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.33□□□□□ -0.28
Col8a1Q00780 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a1Q00780 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col8a1Q00780 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.32□□□□□ -0.28
Col8a1Q00780 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col8a1Q00780 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm22175-201ENSMUST00000175007 78 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm4518-201ENSMUST00000182638 718 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm43474-201ENSMUST00000196415 774 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.32□□□□□ -0.28
Col8a1Q00780 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.32□□□□□ -0.28
Col8a1Q00780 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.32□□□□□ -0.28
Col8a1Q00780 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.32□□□□□ -0.28
Col8a1Q00780 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a1Q00780 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.32□□□□□ -0.28
Col8a1Q00780 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms