Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim43cP86449 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Trim43cP86449 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.04■□□□□ 0.32
Trim43cP86449 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.04■□□□□ 0.32
Trim43cP86449 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim43cP86449 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim43cP86449 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.04■□□□□ 0.32
Trim43cP86449 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.04■□□□□ 0.32
Trim43cP86449 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.04■□□□□ 0.32
Trim43cP86449 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43cP86449 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim43cP86449 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim43cP86449 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Trim43cP86449 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim43cP86449 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Trim43cP86449 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim43cP86449 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43cP86449 Asic1-205ENSMUST00000228185 1818 ntBASIC17.03■□□□□ 0.32
Trim43cP86449 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim43cP86449 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43cP86449 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim43cP86449 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43cP86449 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43cP86449 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43cP86449 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Trim43cP86449 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43cP86449 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim43cP86449 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim43cP86449 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43cP86449 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim43cP86449 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.02■□□□□ 0.32
Trim43cP86449 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trim43cP86449 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.02■□□□□ 0.32
Trim43cP86449 Gm6296-201ENSMUST00000222599 943 ntBASIC17.02■□□□□ 0.32
Trim43cP86449 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43cP86449 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43cP86449 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trim43cP86449 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43cP86449 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43cP86449 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim43cP86449 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43cP86449 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43cP86449 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43cP86449 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim43cP86449 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim43cP86449 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trim43cP86449 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim43cP86449 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim43cP86449 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim43cP86449 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim43cP86449 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim43cP86449 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Trim43cP86449 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms