Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SgcaP82350 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SgcaP82350 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.17□□□□□ -0.3
SgcaP82350 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.17□□□□□ -0.3
SgcaP82350 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.16□□□□□ -0.3
SgcaP82350 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SgcaP82350 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.16□□□□□ -0.3
SgcaP82350 Gm7791-201ENSMUST00000219066 539 ntBASIC13.16□□□□□ -0.3
SgcaP82350 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SgcaP82350 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
SgcaP82350 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SgcaP82350 Phf7-203ENSMUST00000226565 1971 ntBASIC13.16□□□□□ -0.3
SgcaP82350 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcaP82350 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SgcaP82350 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.15□□□□□ -0.3
SgcaP82350 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.15□□□□□ -0.3
SgcaP82350 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
SgcaP82350 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.15□□□□□ -0.3
SgcaP82350 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.15□□□□□ -0.3
SgcaP82350 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.15□□□□□ -0.3
SgcaP82350 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.15□□□□□ -0.3
SgcaP82350 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.15□□□□□ -0.3
SgcaP82350 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.15□□□□□ -0.3
SgcaP82350 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Gm20049-201ENSMUST00000219950 730 ntBASIC13.15□□□□□ -0.3
SgcaP82350 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.15□□□□□ -0.3
SgcaP82350 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcaP82350 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SgcaP82350 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.15□□□□□ -0.31
SgcaP82350 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
SgcaP82350 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SgcaP82350 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SgcaP82350 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SgcaP82350 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.14□□□□□ -0.31
SgcaP82350 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.14□□□□□ -0.31
SgcaP82350 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Gm13186-201ENSMUST00000118031 316 ntBASIC13.14□□□□□ -0.31
SgcaP82350 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.14□□□□□ -0.31
SgcaP82350 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.14□□□□□ -0.31
SgcaP82350 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.14□□□□□ -0.31
SgcaP82350 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SgcaP82350 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcaP82350 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms