Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm44350-201ENSMUST00000197197 138 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Gm44390-201ENSMUST00000197533 144 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Gm44313-201ENSMUST00000198018 138 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Gm44486-201ENSMUST00000198508 138 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Gm44314-201ENSMUST00000199263 138 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Gm44394-201ENSMUST00000199558 138 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Gm44484-201ENSMUST00000199873 138 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Gm44466-201ENSMUST00000200264 138 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Gm44359-201ENSMUST00000200671 138 ntBASIC14.8□□□□□ -0.04
Nup43P59235 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.8□□□□□ -0.04
Nup43P59235 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.8□□□□□ -0.04
Nup43P59235 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nup43P59235 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nup43P59235 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nup43P59235 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Nup43P59235 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Nup43P59235 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Nup43P59235 Gm4535-201ENSMUST00000182274 558 ntBASIC14.79□□□□□ -0.04
Nup43P59235 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Nup43P59235 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Gm10355-201ENSMUST00000097146 517 ntBASIC14.79□□□□□ -0.04
Nup43P59235 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup43P59235 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.78□□□□□ -0.04
Nup43P59235 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nup43P59235 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.78□□□□□ -0.04
Nup43P59235 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nup43P59235 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nup43P59235 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.78□□□□□ -0.04
Nup43P59235 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.78□□□□□ -0.04
Nup43P59235 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.78□□□□□ -0.04
Nup43P59235 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.78□□□□□ -0.04
Nup43P59235 Gm6376-201ENSMUST00000209407 580 ntBASIC14.78□□□□□ -0.04
Nup43P59235 Gm6296-201ENSMUST00000222599 943 ntBASIC14.78□□□□□ -0.04
Nup43P59235 Rps4l-201ENSMUST00000071745 943 ntBASIC14.78□□□□□ -0.04
Nup43P59235 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.78□□□□□ -0.04
Nup43P59235 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Nup43P59235 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup43P59235 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nup43P59235 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup43P59235 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.77□□□□□ -0.04
Nup43P59235 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nup43P59235 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup43P59235 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup43P59235 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Nup43P59235 Gm8344-201ENSMUST00000119813 856 ntBASIC14.77□□□□□ -0.05
Nup43P59235 Gm11452-201ENSMUST00000122376 690 ntBASIC14.77□□□□□ -0.05
Nup43P59235 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Mir8098-201ENSMUST00000184011 137 ntBASIC14.77□□□□□ -0.05
Nup43P59235 Gm27741-201ENSMUST00000185060 237 ntBASIC14.77□□□□□ -0.05
Nup43P59235 Gm28659-201ENSMUST00000188013 759 ntBASIC14.77□□□□□ -0.05
Nup43P59235 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.77□□□□□ -0.05
Nup43P59235 Gm5864-201ENSMUST00000202263 970 ntBASIC14.77□□□□□ -0.05
Nup43P59235 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.77□□□□□ -0.05
Nup43P59235 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.77□□□□□ -0.05
Nup43P59235 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nup43P59235 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
Nup43P59235 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Nup43P59235 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms