Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.78■□□□□ 0.76
Msh6P54276 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.78■□□□□ 0.76
Msh6P54276 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh6P54276 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh6P54276 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh6P54276 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Msh6P54276 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.77■□□□□ 0.76
Msh6P54276 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.77■□□□□ 0.76
Msh6P54276 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.77■□□□□ 0.76
Msh6P54276 Gm20949-201ENSMUST00000206478 952 ntBASIC19.77■□□□□ 0.76
Msh6P54276 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh6P54276 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh6P54276 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh6P54276 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Msh6P54276 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh6P54276 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.77■□□□□ 0.76
Msh6P54276 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Msh6P54276 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.77■□□□□ 0.76
Msh6P54276 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh6P54276 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Msh6P54276 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Msh6P54276 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Msh6P54276 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.76■□□□□ 0.75
Msh6P54276 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Msh6P54276 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Msh6P54276 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.76■□□□□ 0.75
Msh6P54276 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Msh6P54276 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.76■□□□□ 0.75
Msh6P54276 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Msh6P54276 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.76■□□□□ 0.75
Msh6P54276 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh6P54276 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.75■□□□□ 0.75
Msh6P54276 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Msh6P54276 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.75■□□□□ 0.75
Msh6P54276 Mir6990-201ENSMUST00000183724 91 ntBASIC19.75■□□□□ 0.75
Msh6P54276 Mir7023-201ENSMUST00000185093 64 ntBASIC19.75■□□□□ 0.75
Msh6P54276 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Gm20553-201ENSMUST00000204205 844 ntBASIC19.75■□□□□ 0.75
Msh6P54276 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.75■□□□□ 0.75
Msh6P54276 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.75■□□□□ 0.75
Msh6P54276 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.75■□□□□ 0.75
Msh6P54276 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.75■□□□□ 0.75
Msh6P54276 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh6P54276 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 Grk6-207ENSMUST00000225925 2769 ntBASIC19.74■□□□□ 0.75
Msh6P54276 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Msh6P54276 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.74■□□□□ 0.75
Msh6P54276 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Msh6P54276 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh6P54276 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Msh6P54276 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.73■□□□□ 0.75
Msh6P54276 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.73■□□□□ 0.75
Msh6P54276 Gm43474-201ENSMUST00000196415 774 ntBASIC19.73■□□□□ 0.75
Msh6P54276 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms