Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Pdx1P52946 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pdx1P52946 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pdx1P52946 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pdx1P52946 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pdx1P52946 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.5■□□□□ 0.07
Pdx1P52946 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.5■□□□□ 0.07
Pdx1P52946 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.5■□□□□ 0.07
Pdx1P52946 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pdx1P52946 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pdx1P52946 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.5■□□□□ 0.07
Pdx1P52946 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdx1P52946 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pdx1P52946 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.49■□□□□ 0.07
Pdx1P52946 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.49■□□□□ 0.07
Pdx1P52946 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.49■□□□□ 0.07
Pdx1P52946 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.49■□□□□ 0.07
Pdx1P52946 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Pdx1P52946 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.49■□□□□ 0.07
Pdx1P52946 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdx1P52946 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.49■□□□□ 0.07
Pdx1P52946 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pdx1P52946 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Pdx1P52946 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.48■□□□□ 0.07
Pdx1P52946 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.48■□□□□ 0.07
Pdx1P52946 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.48■□□□□ 0.07
Pdx1P52946 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.48■□□□□ 0.07
Pdx1P52946 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pdx1P52946 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.48■□□□□ 0.07
Pdx1P52946 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pdx1P52946 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pdx1P52946 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.48■□□□□ 0.07
Pdx1P52946 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.47■□□□□ 0.07
Pdx1P52946 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.47■□□□□ 0.07
Pdx1P52946 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pdx1P52946 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.47■□□□□ 0.07
Pdx1P52946 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.47■□□□□ 0.07
Pdx1P52946 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.47■□□□□ 0.07
Pdx1P52946 Gm6296-201ENSMUST00000222599 943 ntBASIC15.47■□□□□ 0.07
Pdx1P52946 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pdx1P52946 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdx1P52946 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.46■□□□□ 0.07
Pdx1P52946 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdx1P52946 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdx1P52946 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdx1P52946 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdx1P52946 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.46■□□□□ 0.07
Pdx1P52946 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pdx1P52946 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms