Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ercc3P49135 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ercc3P49135 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ercc3P49135 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ercc3P49135 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc3P49135 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc3P49135 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ercc3P49135 Gm11780-201ENSMUST00000136880 516 ntBASIC18.58■□□□□ 0.56
Ercc3P49135 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.58■□□□□ 0.56
Ercc3P49135 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.58■□□□□ 0.56
Ercc3P49135 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.58■□□□□ 0.56
Ercc3P49135 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc3P49135 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc3P49135 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc3P49135 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc3P49135 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc3P49135 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc3P49135 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc3P49135 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc3P49135 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.58■□□□□ 0.56
Ercc3P49135 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ercc3P49135 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.57■□□□□ 0.56
Ercc3P49135 Gm6257-201ENSMUST00000163864 910 ntBASIC18.57■□□□□ 0.56
Ercc3P49135 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ercc3P49135 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.57■□□□□ 0.56
Ercc3P49135 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ercc3P49135 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.57■□□□□ 0.56
Ercc3P49135 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.57■□□□□ 0.56
Ercc3P49135 Gm8655-201ENSMUST00000221159 852 ntBASIC18.57■□□□□ 0.56
Ercc3P49135 Mzt1-203ENSMUST00000227948 952 ntBASIC18.57■□□□□ 0.56
Ercc3P49135 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ercc3P49135 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ercc3P49135 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
Ercc3P49135 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ercc3P49135 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.57■□□□□ 0.56
Ercc3P49135 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ercc3P49135 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Ercc3P49135 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Ercc3P49135 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc3P49135 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.56■□□□□ 0.56
Ercc3P49135 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.56■□□□□ 0.56
Ercc3P49135 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.56■□□□□ 0.56
Ercc3P49135 Gm4535-201ENSMUST00000182274 558 ntBASIC18.56■□□□□ 0.56
Ercc3P49135 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.56■□□□□ 0.56
Ercc3P49135 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 Gm10355-201ENSMUST00000097146 517 ntBASIC18.56■□□□□ 0.56
Ercc3P49135 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ercc3P49135 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc3P49135 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ercc3P49135 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.55■□□□□ 0.56
Ercc3P49135 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ercc3P49135 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ercc3P49135 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Rps4l-201ENSMUST00000071745 943 ntBASIC18.55■□□□□ 0.56
Ercc3P49135 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ercc3P49135 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Ercc3P49135 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ercc3P49135 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc3P49135 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.55■□□□□ 0.56
Ercc3P49135 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms