Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.44■□□□□ 0.38
Brca1P48754 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.44■□□□□ 0.38
Brca1P48754 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Brca1P48754 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brca1P48754 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Brca1P48754 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Brca1P48754 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brca1P48754 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brca1P48754 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.43■□□□□ 0.38
Brca1P48754 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Brca1P48754 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.43■□□□□ 0.38
Brca1P48754 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brca1P48754 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brca1P48754 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.43■□□□□ 0.38
Brca1P48754 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brca1P48754 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brca1P48754 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brca1P48754 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brca1P48754 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.42■□□□□ 0.38
Brca1P48754 Gm13015-201ENSMUST00000118674 204 ntBASIC17.42■□□□□ 0.38
Brca1P48754 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Gm28630-201ENSMUST00000187806 498 ntBASIC17.42■□□□□ 0.38
Brca1P48754 Gm9794-201ENSMUST00000202370 423 ntBASIC17.42■□□□□ 0.38
Brca1P48754 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Brca1P48754 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Brca1P48754 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.42■□□□□ 0.38
Brca1P48754 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Brca1P48754 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.42■□□□□ 0.38
Brca1P48754 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brca1P48754 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Brca1P48754 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Brca1P48754 Gm43433-201ENSMUST00000196573 481 ntBASIC17.41■□□□□ 0.38
Brca1P48754 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.41■□□□□ 0.38
Brca1P48754 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.41■□□□□ 0.38
Brca1P48754 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brca1P48754 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Brca1P48754 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Brca1P48754 Gm25144-201ENSMUST00000179561 110 ntBASIC17.4■□□□□ 0.38
Brca1P48754 Gm25352-201ENSMUST00000179815 110 ntBASIC17.4■□□□□ 0.38
Brca1P48754 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.4■□□□□ 0.38
Brca1P48754 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Brca1P48754 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Brca1P48754 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Brca1P48754 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Brca1P48754 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Brca1P48754 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brca1P48754 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Brca1P48754 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brca1P48754 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.39■□□□□ 0.37
Brca1P48754 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brca1P48754 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brca1P48754 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Brca1P48754 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brca1P48754 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Brca1P48754 Gm16215-201ENSMUST00000161990 637 ntBASIC17.39■□□□□ 0.37
Brca1P48754 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Brca1P48754 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brca1P48754 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brca1P48754 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.39■□□□□ 0.37
Brca1P48754 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brca1P48754 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms