Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.8□□□□□ -0.04
Nkx2-6P43688 Gm24513-201ENSMUST00000174964 138 ntBASIC14.8□□□□□ -0.04
Nkx2-6P43688 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.8□□□□□ -0.04
Nkx2-6P43688 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.8□□□□□ -0.04
Nkx2-6P43688 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-6P43688 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Nkx2-6P43688 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Gm6257-201ENSMUST00000163864 910 ntBASIC14.78□□□□□ -0.04
Nkx2-6P43688 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Gm27397-201ENSMUST00000184997 107 ntBASIC14.78□□□□□ -0.04
Nkx2-6P43688 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.78□□□□□ -0.04
Nkx2-6P43688 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Gm43575-201ENSMUST00000196420 516 ntBASIC14.78□□□□□ -0.04
Nkx2-6P43688 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.78□□□□□ -0.04
Nkx2-6P43688 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.78□□□□□ -0.04
Nkx2-6P43688 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.78□□□□□ -0.04
Nkx2-6P43688 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-6P43688 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms