Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HttP42859 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HttP42859 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HttP42859 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HttP42859 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HttP42859 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HttP42859 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.56■□□□□ 0.24
HttP42859 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HttP42859 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.56■□□□□ 0.24
HttP42859 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HttP42859 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HttP42859 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HttP42859 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HttP42859 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HttP42859 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HttP42859 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HttP42859 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.56■□□□□ 0.24
HttP42859 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.56■□□□□ 0.24
HttP42859 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.56■□□□□ 0.24
HttP42859 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.55■□□□□ 0.24
HttP42859 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.55■□□□□ 0.24
HttP42859 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.55■□□□□ 0.24
HttP42859 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.55■□□□□ 0.24
HttP42859 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HttP42859 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HttP42859 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.54■□□□□ 0.24
HttP42859 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.54■□□□□ 0.24
HttP42859 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.54■□□□□ 0.24
HttP42859 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.54■□□□□ 0.24
HttP42859 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.54■□□□□ 0.24
HttP42859 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.54■□□□□ 0.24
HttP42859 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Gm11918-201ENSMUST00000121660 179 ntBASIC16.54■□□□□ 0.24
HttP42859 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
HttP42859 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.54■□□□□ 0.24
HttP42859 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HttP42859 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HttP42859 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.53■□□□□ 0.24
HttP42859 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.53■□□□□ 0.24
HttP42859 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HttP42859 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.53■□□□□ 0.24
HttP42859 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HttP42859 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.52■□□□□ 0.24
HttP42859 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.52■□□□□ 0.24
HttP42859 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HttP42859 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.52■□□□□ 0.24
HttP42859 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
HttP42859 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HttP42859 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
HttP42859 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HttP42859 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HttP42859 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HttP42859 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HttP42859 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HttP42859 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
HttP42859 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.52■□□□□ 0.23
HttP42859 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HttP42859 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HttP42859 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms