Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox6P40645 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox6P40645 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.75□□□□□ -0.05
Sox6P40645 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox6P40645 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Sox6P40645 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox6P40645 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.75□□□□□ -0.05
Sox6P40645 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sox6P40645 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox6P40645 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox6P40645 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sox6P40645 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.74□□□□□ -0.05
Sox6P40645 Gm6623-201ENSMUST00000173570 544 ntBASIC14.74□□□□□ -0.05
Sox6P40645 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox6P40645 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox6P40645 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox6P40645 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Sox6P40645 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox6P40645 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox6P40645 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.73□□□□□ -0.05
Sox6P40645 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox6P40645 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox6P40645 Mir770-201ENSMUST00000103252 94 ntBASIC14.73□□□□□ -0.05
Sox6P40645 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sox6P40645 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.73□□□□□ -0.05
Sox6P40645 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.73□□□□□ -0.05
Sox6P40645 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Sox6P40645 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sox6P40645 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox6P40645 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox6P40645 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sox6P40645 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sox6P40645 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sox6P40645 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sox6P40645 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sox6P40645 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sox6P40645 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox6P40645 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.72□□□□□ -0.05
Sox6P40645 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
Sox6P40645 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Sox6P40645 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms