Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Timp3P39876 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Timp3P39876 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.84□□□□□ -0.35
Timp3P39876 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.84□□□□□ -0.35
Timp3P39876 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Timp3P39876 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Timp3P39876 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Timp3P39876 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Timp3P39876 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Timp3P39876 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Timp3P39876 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Timp3P39876 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Timp3P39876 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Timp3P39876 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Timp3P39876 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Timp3P39876 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Timp3P39876 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Timp3P39876 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Timp3P39876 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Timp3P39876 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Timp3P39876 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Gm12497-201ENSMUST00000138778 237 ntBASIC12.83□□□□□ -0.36
Timp3P39876 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Timp3P39876 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.83□□□□□ -0.36
Timp3P39876 Gm2651-201ENSMUST00000203560 838 ntBASIC12.83□□□□□ -0.36
Timp3P39876 Gm9172-201ENSMUST00000212092 954 ntBASIC12.83□□□□□ -0.36
Timp3P39876 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Timp3P39876 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.83□□□□□ -0.36
Timp3P39876 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Timp3P39876 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Timp3P39876 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp3P39876 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.82□□□□□ -0.36
Timp3P39876 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.82□□□□□ -0.36
Timp3P39876 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Gm10060-201ENSMUST00000212002 111 ntBASIC12.82□□□□□ -0.36
Timp3P39876 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.82□□□□□ -0.36
Timp3P39876 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.82□□□□□ -0.36
Timp3P39876 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.82□□□□□ -0.36
Timp3P39876 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Timp3P39876 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Timp3P39876 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.82□□□□□ -0.36
Timp3P39876 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp3P39876 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms