Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Nfkb1P25799 Gm9727-201ENSMUST00000161387 555 ntBASIC16.09■□□□□ 0.17
Nfkb1P25799 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Nfkb1P25799 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.09■□□□□ 0.17
Nfkb1P25799 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nfkb1P25799 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nfkb1P25799 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nfkb1P25799 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Nfkb1P25799 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nfkb1P25799 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nfkb1P25799 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nfkb1P25799 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Nfkb1P25799 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Nfkb1P25799 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nfkb1P25799 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.08■□□□□ 0.16
Nfkb1P25799 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.08■□□□□ 0.16
Nfkb1P25799 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nfkb1P25799 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.08■□□□□ 0.16
Nfkb1P25799 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nfkb1P25799 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nfkb1P25799 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nfkb1P25799 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.08■□□□□ 0.16
Nfkb1P25799 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nfkb1P25799 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.08■□□□□ 0.16
Nfkb1P25799 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nfkb1P25799 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.08■□□□□ 0.16
Nfkb1P25799 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nfkb1P25799 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nfkb1P25799 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.07■□□□□ 0.16
Nfkb1P25799 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nfkb1P25799 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nfkb1P25799 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nfkb1P25799 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.07■□□□□ 0.16
Nfkb1P25799 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nfkb1P25799 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nfkb1P25799 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nfkb1P25799 Gm14494-201ENSMUST00000118786 435 ntBASIC16.07■□□□□ 0.16
Nfkb1P25799 Gm15358-201ENSMUST00000119249 520 ntBASIC16.07■□□□□ 0.16
Nfkb1P25799 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.07■□□□□ 0.16
Nfkb1P25799 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.07■□□□□ 0.16
Nfkb1P25799 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nfkb1P25799 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nfkb1P25799 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.07■□□□□ 0.16
Nfkb1P25799 Gm37153-201ENSMUST00000193637 231 ntBASIC16.07■□□□□ 0.16
Nfkb1P25799 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nfkb1P25799 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nfkb1P25799 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Nfkb1P25799 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nfkb1P25799 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.06■□□□□ 0.16
Nfkb1P25799 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.06■□□□□ 0.16
Nfkb1P25799 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.06■□□□□ 0.16
Nfkb1P25799 Gm2213-201ENSMUST00000197485 688 ntBASIC16.06■□□□□ 0.16
Nfkb1P25799 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.06■□□□□ 0.16
Nfkb1P25799 Gm45167-201ENSMUST00000208007 322 ntBASIC16.06■□□□□ 0.16
Nfkb1P25799 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.06■□□□□ 0.16
Nfkb1P25799 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nfkb1P25799 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Nfkb1P25799 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Nfkb1P25799 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nfkb1P25799 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.05■□□□□ 0.16
Nfkb1P25799 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.05■□□□□ 0.16
Nfkb1P25799 Gm19164-201ENSMUST00000210667 640 ntBASIC16.05■□□□□ 0.16
Nfkb1P25799 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms