Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BdnfP21237 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BdnfP21237 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
BdnfP21237 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.05■□□□□ -0
BdnfP21237 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BdnfP21237 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
BdnfP21237 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.05■□□□□ -0
BdnfP21237 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
BdnfP21237 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
BdnfP21237 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BdnfP21237 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.05■□□□□ -0
BdnfP21237 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
BdnfP21237 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
BdnfP21237 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.04■□□□□ -0
BdnfP21237 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.04■□□□□ -0
BdnfP21237 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.04■□□□□ -0
BdnfP21237 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.04■□□□□ -0
BdnfP21237 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.04■□□□□ -0
BdnfP21237 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
BdnfP21237 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.04■□□□□ -0
BdnfP21237 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.04■□□□□ -0
BdnfP21237 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.04■□□□□ -0
BdnfP21237 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.04■□□□□ -0
BdnfP21237 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
BdnfP21237 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.04■□□□□ -0
BdnfP21237 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
BdnfP21237 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.03■□□□□ -0
BdnfP21237 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.03■□□□□ -0
BdnfP21237 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
BdnfP21237 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
BdnfP21237 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
BdnfP21237 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
BdnfP21237 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.03■□□□□ -0
BdnfP21237 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
BdnfP21237 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
BdnfP21237 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
BdnfP21237 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
BdnfP21237 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BdnfP21237 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.02■□□□□ -0
BdnfP21237 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BdnfP21237 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.02■□□□□ -0
BdnfP21237 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.02■□□□□ -0
BdnfP21237 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BdnfP21237 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
BdnfP21237 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BdnfP21237 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BdnfP21237 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
BdnfP21237 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.02■□□□□ -0
BdnfP21237 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BdnfP21237 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.02■□□□□ -0
BdnfP21237 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.02■□□□□ -0
BdnfP21237 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.02■□□□□ -0
BdnfP21237 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.02■□□□□ -0
BdnfP21237 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.02■□□□□ -0
BdnfP21237 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.02■□□□□ -0
BdnfP21237 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.02■□□□□ -0
BdnfP21237 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BdnfP21237 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
BdnfP21237 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BdnfP21237 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.02□□□□□ -0.01
BdnfP21237 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
BdnfP21237 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
BdnfP21237 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BdnfP21237 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BdnfP21237 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
BdnfP21237 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.02□□□□□ -0.01
BdnfP21237 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BdnfP21237 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BdnfP21237 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BdnfP21237 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BdnfP21237 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BdnfP21237 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
BdnfP21237 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BdnfP21237 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BdnfP21237 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms