Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.36□□□□□ -0.11
Hmgn1P18608 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hmgn1P18608 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.36□□□□□ -0.11
Hmgn1P18608 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgn1P18608 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.36□□□□□ -0.11
Hmgn1P18608 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.36□□□□□ -0.11
Hmgn1P18608 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hmgn1P18608 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgn1P18608 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn1P18608 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hmgn1P18608 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.35□□□□□ -0.11
Hmgn1P18608 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hmgn1P18608 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Hmgn1P18608 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.35□□□□□ -0.11
Hmgn1P18608 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hmgn1P18608 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.35□□□□□ -0.11
Hmgn1P18608 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.35□□□□□ -0.11
Hmgn1P18608 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.35□□□□□ -0.11
Hmgn1P18608 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hmgn1P18608 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hmgn1P18608 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn1P18608 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hmgn1P18608 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.34□□□□□ -0.11
Hmgn1P18608 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn1P18608 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn1P18608 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn1P18608 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn1P18608 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgn1P18608 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgn1P18608 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgn1P18608 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Hmgn1P18608 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hmgn1P18608 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn1P18608 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn1P18608 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn1P18608 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn1P18608 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.33□□□□□ -0.12
Hmgn1P18608 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.33□□□□□ -0.12
Hmgn1P18608 Gm13436-201ENSMUST00000120418 567 ntBASIC14.33□□□□□ -0.12
Hmgn1P18608 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.33□□□□□ -0.12
Hmgn1P18608 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hmgn1P18608 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.33□□□□□ -0.12
Hmgn1P18608 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn1P18608 Gm10812-201ENSMUST00000099864 546 ntBASIC14.33□□□□□ -0.12
Hmgn1P18608 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn1P18608 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn1P18608 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hmgn1P18608 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Hmgn1P18608 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn1P18608 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn1P18608 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms