Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
P04224 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
P04224 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
P04224 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
P04224 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.77□□□□□ -0.2
P04224 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
P04224 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
P04224 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
P04224 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
P04224 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.77□□□□□ -0.21
P04224 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.77□□□□□ -0.21
P04224 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.77□□□□□ -0.21
P04224 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.77□□□□□ -0.21
P04224 Gm7791-201ENSMUST00000219066 539 ntBASIC13.77□□□□□ -0.21
P04224 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.77□□□□□ -0.21
P04224 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04224 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
P04224 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.76□□□□□ -0.21
P04224 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
P04224 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
P04224 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Gm15039-201ENSMUST00000118914 875 ntBASIC13.76□□□□□ -0.21
P04224 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.76□□□□□ -0.21
P04224 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
P04224 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
P04224 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
P04224 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.76□□□□□ -0.21
P04224 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.76□□□□□ -0.21
P04224 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04224 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.76□□□□□ -0.21
P04224 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
P04224 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
P04224 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.75□□□□□ -0.21
P04224 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
P04224 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
P04224 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.75□□□□□ -0.21
P04224 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.75□□□□□ -0.21
P04224 Timm23-208ENSMUST00000226683 750 ntBASIC13.75□□□□□ -0.21
P04224 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
P04224 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04224 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms