Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Gm13418-201ENSMUST00000119097 944 ntBASIC14.18□□□□□ -0.14
P01808 Gm8344-201ENSMUST00000119813 856 ntBASIC14.18□□□□□ -0.14
P01808 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.18□□□□□ -0.14
P01808 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.18□□□□□ -0.14
P01808 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
P01808 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.18□□□□□ -0.14
P01808 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.18□□□□□ -0.14
P01808 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
P01808 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.18□□□□□ -0.14
P01808 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
P01808 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.18□□□□□ -0.14
P01808 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01808 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.17□□□□□ -0.14
P01808 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.17□□□□□ -0.14
P01808 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.17□□□□□ -0.14
P01808 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.17□□□□□ -0.14
P01808 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Gm19164-201ENSMUST00000210667 640 ntBASIC14.17□□□□□ -0.14
P01808 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.17□□□□□ -0.14
P01808 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Grk6-207ENSMUST00000225925 2769 ntBASIC14.17□□□□□ -0.14
P01808 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
P01808 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
P01808 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
P01808 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01808 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01808 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01808 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
P01808 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P01808 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01808 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01808 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
P01808 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
P01808 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
P01808 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
P01808 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01808 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01808 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01808 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01808 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.16□□□□□ -0.14
P01808 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01808 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
P01808 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P01808 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.15□□□□□ -0.14
P01808 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.15□□□□□ -0.14
P01808 Gm11452-201ENSMUST00000122376 690 ntBASIC14.15□□□□□ -0.14
P01808 Gm27646-201ENSMUST00000183989 110 ntBASIC14.15□□□□□ -0.14
P01808 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.15□□□□□ -0.14
P01808 Gm6376-201ENSMUST00000209407 580 ntBASIC14.15□□□□□ -0.14
P01808 Rps4l-201ENSMUST00000071745 943 ntBASIC14.15□□□□□ -0.14
P01808 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01808 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms