Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tom1O88746 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.61■□□□□ 0.89
Tom1O88746 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC20.61■□□□□ 0.89
Tom1O88746 Gm8318-201ENSMUST00000182954 872 ntBASIC20.61■□□□□ 0.89
Tom1O88746 Gm8969-201ENSMUST00000199694 526 ntBASIC20.61■□□□□ 0.89
Tom1O88746 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tom1O88746 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tom1O88746 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tom1O88746 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tom1O88746 Gm5320-201ENSMUST00000207163 1519 ntBASIC20.61■□□□□ 0.89
Tom1O88746 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tom1O88746 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tom1O88746 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tom1O88746 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tom1O88746 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tom1O88746 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tom1O88746 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tom1O88746 Iqck-206ENSMUST00000208658 2891 ntBASIC20.6■□□□□ 0.89
Tom1O88746 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.6■□□□□ 0.89
Tom1O88746 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tom1O88746 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tom1O88746 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tom1O88746 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tom1O88746 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tom1O88746 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC20.6■□□□□ 0.89
Tom1O88746 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tom1O88746 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Tom1O88746 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC20.6■□□□□ 0.89
Tom1O88746 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tom1O88746 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tom1O88746 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tom1O88746 AC131068.2-201ENSMUST00000226175 1453 ntBASIC20.6■□□□□ 0.89
Tom1O88746 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Tom1O88746 Mir3102-201ENSMUST00000175555 104 ntBASIC20.59■□□□□ 0.89
Tom1O88746 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tom1O88746 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tom1O88746 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tom1O88746 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tom1O88746 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.58■□□□□ 0.89
Tom1O88746 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tom1O88746 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC20.58■□□□□ 0.89
Tom1O88746 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Tom1O88746 Mir1982-201ENSMUST00000157368 74 ntBASIC20.58■□□□□ 0.89
Tom1O88746 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC20.58■□□□□ 0.89
Tom1O88746 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC20.58■□□□□ 0.89
Tom1O88746 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC20.58■□□□□ 0.89
Tom1O88746 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tom1O88746 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tom1O88746 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tom1O88746 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tom1O88746 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tom1O88746 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tom1O88746 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tom1O88746 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tom1O88746 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Tom1O88746 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Tom1O88746 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tom1O88746 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tom1O88746 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tom1O88746 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tom1O88746 Gm24543-201ENSMUST00000103867 82 ntBASIC20.57■□□□□ 0.88
Tom1O88746 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tom1O88746 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tom1O88746 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tom1O88746 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC20.57■□□□□ 0.88
Tom1O88746 Gm9002-201ENSMUST00000178437 499 ntBASIC20.57■□□□□ 0.88
Tom1O88746 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tom1O88746 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tom1O88746 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tom1O88746 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tom1O88746 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tom1O88746 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC20.56■□□□□ 0.88
Tom1O88746 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC20.56■□□□□ 0.88
Tom1O88746 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tom1O88746 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC20.56■□□□□ 0.88
Tom1O88746 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tom1O88746 Gm10499-201ENSMUST00000174094 934 ntBASIC20.56■□□□□ 0.88
Tom1O88746 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tom1O88746 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC20.56■□□□□ 0.88
Tom1O88746 Shd-206ENSMUST00000225145 998 ntBASIC20.56■□□□□ 0.88
Tom1O88746 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tom1O88746 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tom1O88746 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tom1O88746 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tom1O88746 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.56■□□□□ 0.88
Tom1O88746 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tom1O88746 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms