Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gm10052-201ENSMUST00000168019 960 ntBASIC14.23□□□□□ -0.13
Pdlim3O70209 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Gm44430-201ENSMUST00000203376 995 ntBASIC14.23□□□□□ -0.13
Pdlim3O70209 Gm7729-201ENSMUST00000050143 801 ntBASIC14.23□□□□□ -0.13
Pdlim3O70209 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.23□□□□□ -0.13
Pdlim3O70209 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim3O70209 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Pdlim3O70209 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.23□□□□□ -0.13
Pdlim3O70209 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Pdlim3O70209 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pdlim3O70209 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdlim3O70209 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pdlim3O70209 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.22□□□□□ -0.13
Pdlim3O70209 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Mir5130-201ENSMUST00000175160 84 ntBASIC14.22□□□□□ -0.13
Pdlim3O70209 Gm22240-201ENSMUST00000175225 82 ntBASIC14.22□□□□□ -0.13
Pdlim3O70209 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.22□□□□□ -0.13
Pdlim3O70209 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.22□□□□□ -0.13
Pdlim3O70209 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdlim3O70209 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pdlim3O70209 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim3O70209 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pdlim3O70209 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pdlim3O70209 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pdlim3O70209 Gm15039-201ENSMUST00000118914 875 ntBASIC14.21□□□□□ -0.13
Pdlim3O70209 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pdlim3O70209 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.21□□□□□ -0.13
Pdlim3O70209 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.21□□□□□ -0.13
Pdlim3O70209 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pdlim3O70209 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pdlim3O70209 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim3O70209 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim3O70209 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim3O70209 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim3O70209 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim3O70209 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim3O70209 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.2□□□□□ -0.14
Pdlim3O70209 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.2□□□□□ -0.14
Pdlim3O70209 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.2□□□□□ -0.14
Pdlim3O70209 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim3O70209 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim3O70209 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms