Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13□□□□□ -0.33
SncaO55042 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SncaO55042 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SncaO55042 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13□□□□□ -0.33
SncaO55042 Gm10052-201ENSMUST00000168019 960 ntBASIC13□□□□□ -0.33
SncaO55042 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13□□□□□ -0.33
SncaO55042 AC134329.2-201ENSMUST00000217897 428 ntBASIC13□□□□□ -0.33
SncaO55042 Gm7729-201ENSMUST00000050143 801 ntBASIC13□□□□□ -0.33
SncaO55042 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13□□□□□ -0.33
SncaO55042 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SncaO55042 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
SncaO55042 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SncaO55042 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SncaO55042 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SncaO55042 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
SncaO55042 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SncaO55042 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.99□□□□□ -0.33
SncaO55042 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
SncaO55042 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SncaO55042 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
SncaO55042 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
SncaO55042 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
SncaO55042 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.98□□□□□ -0.33
SncaO55042 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Gm11355-201ENSMUST00000121120 306 ntBASIC12.98□□□□□ -0.33
SncaO55042 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.98□□□□□ -0.33
SncaO55042 Gm37722-201ENSMUST00000193757 208 ntBASIC12.98□□□□□ -0.33
SncaO55042 Gm43799-201ENSMUST00000201845 579 ntBASIC12.98□□□□□ -0.33
SncaO55042 Gm18101-201ENSMUST00000215769 548 ntBASIC12.98□□□□□ -0.33
SncaO55042 Gm21559-201ENSMUST00000220638 855 ntBASIC12.98□□□□□ -0.33
SncaO55042 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Gm8587-201ENSMUST00000076538 843 ntBASIC12.98□□□□□ -0.33
SncaO55042 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
SncaO55042 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.98□□□□□ -0.33
SncaO55042 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.98□□□□□ -0.33
SncaO55042 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.98□□□□□ -0.33
SncaO55042 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SncaO55042 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SncaO55042 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SncaO55042 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms