Protein–RNA interactions for Protein: O55013

Trappc3, Trafficking protein particle complex subunit 3, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc3O55013 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trappc3O55013 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trappc3O55013 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trappc3O55013 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trappc3O55013 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trappc3O55013 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trappc3O55013 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trappc3O55013 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Trappc3O55013 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.83■□□□□ 0.28
Trappc3O55013 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.83■□□□□ 0.28
Trappc3O55013 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.83■□□□□ 0.28
Trappc3O55013 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.83■□□□□ 0.28
Trappc3O55013 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trappc3O55013 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trappc3O55013 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.82■□□□□ 0.28
Trappc3O55013 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.82■□□□□ 0.28
Trappc3O55013 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Gm4459-201ENSMUST00000118750 468 ntBASIC16.82■□□□□ 0.28
Trappc3O55013 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.82■□□□□ 0.28
Trappc3O55013 Gm8655-201ENSMUST00000221159 852 ntBASIC16.82■□□□□ 0.28
Trappc3O55013 Gm6296-201ENSMUST00000222599 943 ntBASIC16.82■□□□□ 0.28
Trappc3O55013 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.82■□□□□ 0.28
Trappc3O55013 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trappc3O55013 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trappc3O55013 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trappc3O55013 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Trappc3O55013 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trappc3O55013 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.81■□□□□ 0.28
Trappc3O55013 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trappc3O55013 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trappc3O55013 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trappc3O55013 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trappc3O55013 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trappc3O55013 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.81■□□□□ 0.28
Trappc3O55013 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.81■□□□□ 0.28
Trappc3O55013 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trappc3O55013 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trappc3O55013 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.81■□□□□ 0.28
Trappc3O55013 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trappc3O55013 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.81■□□□□ 0.28
Trappc3O55013 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trappc3O55013 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trappc3O55013 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Trappc3O55013 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44357-201ENSMUST00000195897 142 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm19658-201ENSMUST00000196231 138 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44367-201ENSMUST00000196836 138 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44350-201ENSMUST00000197197 138 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44390-201ENSMUST00000197533 144 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44313-201ENSMUST00000198018 138 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44486-201ENSMUST00000198508 138 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44314-201ENSMUST00000199263 138 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44394-201ENSMUST00000199558 138 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44484-201ENSMUST00000199873 138 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44466-201ENSMUST00000200264 138 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Gm44359-201ENSMUST00000200671 138 ntBASIC16.8■□□□□ 0.28
Trappc3O55013 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trappc3O55013 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trappc3O55013 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trappc3O55013 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.8■□□□□ 0.28
Trappc3O55013 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trappc3O55013 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms