Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cldn5O54942 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldn5O54942 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cldn5O54942 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.24■□□□□ 0.19
Cldn5O54942 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.24■□□□□ 0.19
Cldn5O54942 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.24■□□□□ 0.19
Cldn5O54942 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.24■□□□□ 0.19
Cldn5O54942 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldn5O54942 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cldn5O54942 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldn5O54942 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Cldn5O54942 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cldn5O54942 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.23■□□□□ 0.19
Cldn5O54942 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cldn5O54942 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.23■□□□□ 0.19
Cldn5O54942 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.23■□□□□ 0.19
Cldn5O54942 Gm37153-201ENSMUST00000193637 231 ntBASIC16.23■□□□□ 0.19
Cldn5O54942 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.23■□□□□ 0.19
Cldn5O54942 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.23■□□□□ 0.19
Cldn5O54942 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.23■□□□□ 0.19
Cldn5O54942 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn5O54942 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.22■□□□□ 0.19
Cldn5O54942 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cldn5O54942 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Gm11779-201ENSMUST00000118541 368 ntBASIC16.22■□□□□ 0.19
Cldn5O54942 Gm14140-201ENSMUST00000119999 995 ntBASIC16.22■□□□□ 0.19
Cldn5O54942 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cldn5O54942 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
Cldn5O54942 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cldn5O54942 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cldn5O54942 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn5O54942 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.21■□□□□ 0.19
Cldn5O54942 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cldn5O54942 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.21■□□□□ 0.19
Cldn5O54942 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.21■□□□□ 0.19
Cldn5O54942 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Cldn5O54942 Gm12260-201ENSMUST00000122447 411 ntBASIC16.21■□□□□ 0.19
Cldn5O54942 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Cldn5O54942 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 Gm4899-201ENSMUST00000178708 719 ntBASIC16.21■□□□□ 0.19
Cldn5O54942 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.21■□□□□ 0.19
Cldn5O54942 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.21■□□□□ 0.19
Cldn5O54942 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.21■□□□□ 0.19
Cldn5O54942 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cldn5O54942 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn5O54942 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.21■□□□□ 0.18
Cldn5O54942 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms