Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.65■□□□□ 0.58
Smarce1O54941 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smarce1O54941 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarce1O54941 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarce1O54941 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarce1O54941 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarce1O54941 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarce1O54941 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smarce1O54941 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smarce1O54941 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smarce1O54941 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smarce1O54941 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.64■□□□□ 0.58
Smarce1O54941 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.64■□□□□ 0.57
Smarce1O54941 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Mir6982-201ENSMUST00000184354 68 ntBASIC18.64■□□□□ 0.57
Smarce1O54941 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Smarce1O54941 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Smarce1O54941 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smarce1O54941 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Smarce1O54941 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarce1O54941 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Smarce1O54941 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Smarce1O54941 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Smarce1O54941 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarce1O54941 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarce1O54941 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarce1O54941 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarce1O54941 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.62■□□□□ 0.57
Smarce1O54941 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarce1O54941 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Smarce1O54941 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.62■□□□□ 0.57
Smarce1O54941 Gm5587-201ENSMUST00000206270 674 ntBASIC18.62■□□□□ 0.57
Smarce1O54941 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Smarce1O54941 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarce1O54941 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Smarce1O54941 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Smarce1O54941 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarce1O54941 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarce1O54941 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Smarce1O54941 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Smarce1O54941 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smarce1O54941 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smarce1O54941 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.61■□□□□ 0.57
Smarce1O54941 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.61■□□□□ 0.57
Smarce1O54941 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Smarce1O54941 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smarce1O54941 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms