Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.02■□□□□ 0.32
Clk2O35491 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.02■□□□□ 0.32
Clk2O35491 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.02■□□□□ 0.32
Clk2O35491 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.02■□□□□ 0.32
Clk2O35491 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clk2O35491 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clk2O35491 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Clk2O35491 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Clk2O35491 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clk2O35491 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.01■□□□□ 0.31
Clk2O35491 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Clk2O35491 Gm14722-201ENSMUST00000118943 689 ntBASIC17.01■□□□□ 0.31
Clk2O35491 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.01■□□□□ 0.31
Clk2O35491 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clk2O35491 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clk2O35491 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Clk2O35491 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Clk2O35491 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17■□□□□ 0.31
Clk2O35491 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk2O35491 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Clk2O35491 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Clk2O35491 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Clk2O35491 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.99■□□□□ 0.31
Clk2O35491 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.99■□□□□ 0.31
Clk2O35491 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.99■□□□□ 0.31
Clk2O35491 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.99■□□□□ 0.31
Clk2O35491 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.99■□□□□ 0.31
Clk2O35491 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
Clk2O35491 Gm4995-201ENSMUST00000117247 432 ntBASIC16.99■□□□□ 0.31
Clk2O35491 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.99■□□□□ 0.31
Clk2O35491 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.99■□□□□ 0.31
Clk2O35491 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.99■□□□□ 0.31
Clk2O35491 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.99■□□□□ 0.31
Clk2O35491 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.99■□□□□ 0.31
Clk2O35491 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Clk2O35491 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clk2O35491 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk2O35491 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.98■□□□□ 0.31
Clk2O35491 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk2O35491 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk2O35491 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk2O35491 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.98■□□□□ 0.31
Clk2O35491 Mir8117-201ENSMUST00000184773 107 ntBASIC16.98■□□□□ 0.31
Clk2O35491 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk2O35491 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.98■□□□□ 0.31
Clk2O35491 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.98■□□□□ 0.31
Clk2O35491 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.98■□□□□ 0.31
Clk2O35491 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clk2O35491 Gm5867-201ENSMUST00000063197 592 ntBASIC16.98■□□□□ 0.31
Clk2O35491 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk2O35491 Gm10175-201ENSMUST00000086013 645 ntBASIC16.98■□□□□ 0.31
Clk2O35491 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk2O35491 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.98■□□□□ 0.31
Clk2O35491 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk2O35491 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms