Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.26□□□□□ -0.45
Tnfsf11O35235 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.25□□□□□ -0.45
Tnfsf11O35235 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf11O35235 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.24□□□□□ -0.45
Tnfsf11O35235 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Tnfsf11O35235 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Gm44450-201ENSMUST00000199528 114 ntBASIC12.24□□□□□ -0.45
Tnfsf11O35235 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.24□□□□□ -0.45
Tnfsf11O35235 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.24□□□□□ -0.45
Tnfsf11O35235 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf11O35235 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Gm20760-201ENSMUST00000179197 648 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms