Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ercc2O08811 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.04■□□□□ 0.16
Ercc2O08811 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ercc2O08811 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Ercc2O08811 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.04■□□□□ 0.16
Ercc2O08811 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ercc2O08811 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.04■□□□□ 0.16
Ercc2O08811 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.03■□□□□ 0.16
Ercc2O08811 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.03■□□□□ 0.16
Ercc2O08811 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.03■□□□□ 0.16
Ercc2O08811 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.03■□□□□ 0.16
Ercc2O08811 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Ercc2O08811 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.03■□□□□ 0.16
Ercc2O08811 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ercc2O08811 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ercc2O08811 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ercc2O08811 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ercc2O08811 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ercc2O08811 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.02■□□□□ 0.16
Ercc2O08811 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ercc2O08811 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ercc2O08811 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.02■□□□□ 0.16
Ercc2O08811 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.02■□□□□ 0.16
Ercc2O08811 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.02■□□□□ 0.16
Ercc2O08811 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ercc2O08811 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ercc2O08811 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ercc2O08811 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ercc2O08811 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ercc2O08811 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ercc2O08811 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.01■□□□□ 0.15
Ercc2O08811 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ercc2O08811 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ercc2O08811 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ercc2O08811 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Ercc2O08811 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.01■□□□□ 0.15
Ercc2O08811 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44357-201ENSMUST00000195897 142 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm19658-201ENSMUST00000196231 138 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44367-201ENSMUST00000196836 138 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44350-201ENSMUST00000197197 138 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44390-201ENSMUST00000197533 144 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44313-201ENSMUST00000198018 138 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44486-201ENSMUST00000198508 138 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44314-201ENSMUST00000199263 138 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44394-201ENSMUST00000199558 138 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44484-201ENSMUST00000199873 138 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44466-201ENSMUST00000200264 138 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm44359-201ENSMUST00000200671 138 ntBASIC16.01■□□□□ 0.15
Ercc2O08811 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.01■□□□□ 0.15
Ercc2O08811 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ercc2O08811 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ercc2O08811 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms