Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna9G3X8Z7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chrna9G3X8Z7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chrna9G3X8Z7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chrna9G3X8Z7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Gm15372-201ENSMUST00000120729 834 ntBASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Gm7284-201ENSMUST00000131667 944 ntBASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Gm7506-201ENSMUST00000207758 815 ntBASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Gm18622-201ENSMUST00000219361 595 ntBASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chrna9G3X8Z7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Gm33142-201ENSMUST00000193913 867 ntBASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna9G3X8Z7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Gm4459-201ENSMUST00000118750 468 ntBASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Gm14722-201ENSMUST00000118943 689 ntBASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna9G3X8Z7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms