Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Gm7506-201ENSMUST00000207758 815 ntBASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Mzt1-203ENSMUST00000227948 952 ntBASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh11xF6ZNL5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh11xF6ZNL5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Gm18622-201ENSMUST00000219361 595 ntBASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh11xF6ZNL5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh11xF6ZNL5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh11xF6ZNL5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.27■□□□□ 0.35
Pcdh11xF6ZNL5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh11xF6ZNL5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh11xF6ZNL5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh11xF6ZNL5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh11xF6ZNL5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdh11xF6ZNL5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdh11xF6ZNL5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdh11xF6ZNL5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdh11xF6ZNL5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdh11xF6ZNL5 Gm19164-201ENSMUST00000210667 640 ntBASIC17.26■□□□□ 0.35
Pcdh11xF6ZNL5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms