Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Gm15483-201ENSMUST00000120338 456 ntBASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Gm14767-201ENSMUST00000121559 586 ntBASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hfm1D3Z4R1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Gm18049-201ENSMUST00000208909 581 ntBASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Gm7775-201ENSMUST00000218871 853 ntBASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC21.79■■□□□ 1.08
Hfm1D3Z4R1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Gm38327-201ENSMUST00000195852 1755 ntBASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hfm1D3Z4R1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Hfm1D3Z4R1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Gm16215-201ENSMUST00000161990 637 ntBASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Gm18766-201ENSMUST00000189811 808 ntBASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hfm1D3Z4R1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms