Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.6■□□□□ 0.25
Rfx8D3YU81 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx8D3YU81 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx8D3YU81 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx8D3YU81 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.6■□□□□ 0.25
Rfx8D3YU81 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx8D3YU81 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rfx8D3YU81 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx8D3YU81 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm7153-201ENSMUST00000117092 455 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm8825-201ENSMUST00000182565 998 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm4518-201ENSMUST00000182638 718 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 App-207ENSMUST00000227737 2827 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Rfx8D3YU81 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.59■□□□□ 0.25
Rfx8D3YU81 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx8D3YU81 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Rfx8D3YU81 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx8D3YU81 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx8D3YU81 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Rfx8D3YU81 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx8D3YU81 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Rfx8D3YU81 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx8D3YU81 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Gm43347-201ENSMUST00000200226 580 ntBASIC16.58■□□□□ 0.24
Rfx8D3YU81 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
Rfx8D3YU81 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx8D3YU81 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.57■□□□□ 0.24
Rfx8D3YU81 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Gm4459-201ENSMUST00000118750 468 ntBASIC16.57■□□□□ 0.24
Rfx8D3YU81 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Gm34391-201ENSMUST00000203706 907 ntBASIC16.57■□□□□ 0.24
Rfx8D3YU81 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.57■□□□□ 0.24
Rfx8D3YU81 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx8D3YU81 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms