Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-4A0A0G2JG01 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-4A0A0G2JG01 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms