Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gm10013-201ENSMUST00000106074 672 ntBASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gm37722-201ENSMUST00000193757 208 ntBASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.09□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ighv1-11A0A0A6YWI9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ighv1-11A0A0A6YWI9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms