Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6d-7A0A075B6B0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.47
Trav6d-7A0A075B6B0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6d-7A0A075B6B0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.47
Trav6d-7A0A075B6B0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6d-7A0A075B6B0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-7A0A075B6B0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trav6d-7A0A075B6B0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm13186-201ENSMUST00000118031 316 ntBASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Mir3081-201ENSMUST00000175305 84 ntBASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm27742-201ENSMUST00000184667 60 ntBASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm27741-201ENSMUST00000185060 237 ntBASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm18669-201ENSMUST00000216049 778 ntBASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm18115-201ENSMUST00000221209 621 ntBASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms