Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 BC037039-201ENSMUST00000192003 2205 ntBASIC12.48□□□□□ -0.41
Trav17A0A075B655 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.48□□□□□ -0.41
Trav17A0A075B655 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Gm10566-201ENSMUST00000086739 996 ntBASIC12.48□□□□□ -0.41
Trav17A0A075B655 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav17A0A075B655 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav17A0A075B655 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.47□□□□□ -0.41
Trav17A0A075B655 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav17A0A075B655 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav17A0A075B655 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav17A0A075B655 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav17A0A075B655 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav17A0A075B655 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav17A0A075B655 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav17A0A075B655 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav17A0A075B655 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav17A0A075B655 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav17A0A075B655 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav17A0A075B655 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav17A0A075B655 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav17A0A075B655 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms