Protein–RNA interactions for Protein: A0A075B647

Trav9-2, T cell receptor alpha variable 9-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-2A0A075B647 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Gm17971-201ENSMUST00000190239 806 ntBASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-2A0A075B647 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm24589-201ENSMUST00000116692 94 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm8825-201ENSMUST00000182565 998 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm4518-201ENSMUST00000182638 718 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm43347-201ENSMUST00000200226 580 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Prob1-201ENSMUST00000097619 3021 ntBASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9-2A0A075B647 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Gm4459-201ENSMUST00000118750 468 ntBASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Gm34391-201ENSMUST00000203706 907 ntBASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav9-2A0A075B647 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms