Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
H2afb1S4R1E0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb1S4R1E0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Gm15565-201ENSMUST00000118890 427 ntBASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Gm10052-201ENSMUST00000168019 960 ntBASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Gm7729-201ENSMUST00000050143 801 ntBASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb1S4R1E0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Gm6433-201ENSMUST00000118634 875 ntBASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb1S4R1E0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms