Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Mir3113-201ENSMUST00000175478 76 ntBASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Gm8000-201ENSMUST00000188378 592 ntBASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn8aQ9WTU3 Gm10499-201ENSMUST00000174094 934 ntBASIC15.71■□□□□ 0.1
Scn8aQ9WTU3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Scn8aQ9WTU3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Scn8aQ9WTU3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn8aQ9WTU3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn8aQ9WTU3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scn8aQ9WTU3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn8aQ9WTU3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn8aQ9WTU3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn8aQ9WTU3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Dancr-204ENSMUST00000132389 2347 ntBASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn8aQ9WTU3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Mir8117-201ENSMUST00000184773 107 ntBASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn8aQ9WTU3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms