Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn11aQ9R053 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Scn11aQ9R053 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn11aQ9R053 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn11aQ9R053 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Scn11aQ9R053 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn11aQ9R053 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Scn11aQ9R053 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn11aQ9R053 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.45■□□□□ 0.54
Scn11aQ9R053 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.45■□□□□ 0.54
Scn11aQ9R053 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.45■□□□□ 0.54
Scn11aQ9R053 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn11aQ9R053 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn11aQ9R053 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Gm27622-201ENSMUST00000183779 60 ntBASIC18.44■□□□□ 0.54
Scn11aQ9R053 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn11aQ9R053 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.43■□□□□ 0.54
Scn11aQ9R053 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.43■□□□□ 0.54
Scn11aQ9R053 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn11aQ9R053 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Rprl2-201ENSMUST00000157150 290 ntBASIC18.42■□□□□ 0.54
Scn11aQ9R053 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn11aQ9R053 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.42■□□□□ 0.54
Scn11aQ9R053 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn11aQ9R053 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.42■□□□□ 0.54
Scn11aQ9R053 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Gm43474-201ENSMUST00000196415 774 ntBASIC18.42■□□□□ 0.54
Scn11aQ9R053 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn11aQ9R053 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn11aQ9R053 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Scn11aQ9R053 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
Scn11aQ9R053 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn11aQ9R053 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Scn11aQ9R053 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms