Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a2Q9JLR1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a2Q9JLR1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a2Q9JLR1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.15□□□□□ -0.14
Sec61a2Q9JLR1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms