Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Gm13148-201ENSMUST00000118892 745 ntBASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Gm11643-201ENSMUST00000119578 864 ntBASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Gm26571-201ENSMUST00000181399 666 ntBASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Gm26524-201ENSMUST00000192339 390 ntBASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trem1Q9JKE2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trem1Q9JKE2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Gm10849-201ENSMUST00000100397 618 ntBASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms