Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Gm9987-201ENSMUST00000069768 567 ntBASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 App-207ENSMUST00000227737 2827 ntBASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herpud1Q9JJK5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herpud1Q9JJK5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Herpud1Q9JJK5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Herpud1Q9JJK5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herpud1Q9JJK5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms