Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm30025-201ENSMUST00000218555 728 ntBASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf13bQ9ET35 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf13bQ9ET35 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm13436-201ENSMUST00000120418 567 ntBASIC12.35□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm6257-201ENSMUST00000163864 910 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms