Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtp4Q9ER80 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rtp4Q9ER80 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rtp4Q9ER80 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Rtp4Q9ER80 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rtp4Q9ER80 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rtp4Q9ER80 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rtp4Q9ER80 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rtp4Q9ER80 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Gm7862-201ENSMUST00000121461 292 ntBASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Gm25745-201ENSMUST00000174945 133 ntBASIC14.7□□□□□ -0.06
Rtp4Q9ER80 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtp4Q9ER80 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.69□□□□□ -0.06
Rtp4Q9ER80 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Gm2651-201ENSMUST00000203560 838 ntBASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms